No chance because in the roster editor the 11 numbers for the skintones are assigned to color slots the game doesn't have anymore. If we could give in the skintone number manually it wouldn't be that big of a problem. But we have representative numbers for the skin tones which don't match since Ty didn't change them, but 2k changed them.
I have found out what has caused the problem. I edited the "clutch" rating and it seems that also changing this rating causes skintone issues. I do not know how this correlates, but I tested it in a blank roster file with Sabathia and Granderson, changed their clutch rating in the editor without changing anything else and both where nougat in game after that.